{"id":3979,"date":"2026-06-09T03:33:30","date_gmt":"2026-06-09T10:33:30","guid":{"rendered":"https:\/\/coherencegeometry.com\/?p=3979"},"modified":"2026-06-10T16:22:08","modified_gmt":"2026-06-10T23:22:08","slug":"emergent-duplex-helicity-from-coherence-alignment-and-transport","status":"publish","type":"post","link":"https:\/\/coherencegeometry.com\/index.php\/2026\/06\/09\/emergent-duplex-helicity-from-coherence-alignment-and-transport\/","title":{"rendered":"Emergent Duplex Helicity from Coherence Alignment and Transport"},"content":{"rendered":"\n

Internal ID:<\/strong> CGI-RSR-000028
Author(s):<\/strong> Barry L. Petersen
Document Type:<\/strong> Research Paper
Publication Date:<\/strong> June 2026
Original Creation Date:<\/strong> June 9, 2026
Status:<\/strong> Public
Domains:<\/strong> Biology, Chemistry, Physics
Sub-Domain:<\/strong> Molecular Structure, DNA
Research Topics:<\/strong> DNA, Duplex helicity, Transport, Operator dynamics<\/p>\n\n\n\n

Abstract<\/h3>\n\n\n\n


Helical structures are commonly modeled by prescribing a rotational geometry, a preferred twist angle, or an equivalent geometric construction rule. In this work, we investigate an alternative approach in which helicity emerges from local coherence dynamics rather than from an explicitly imposed helical instruction. We introduce a minimal duplex model consisting of a three-channel coherence state and a fixed (\\( 3\\times3 \\)) coherence operator. Admissible local states align with the coherence mode supported by the operator. A transport observable is obtained by projecting the resulting response onto an axis determined by the antisymmetric part of the operator, and the resulting transport increment is applied recursively as a local frame rotation during duplex growth. The construction produces stable duplex helicity without an imposed global helical scaffold, target curve, or prescribed twist angle. Diagnostic examples demonstrate complete transport cycles, persistent long-range helical organization, and operator-controlled handedness. Numerical experiments further indicate that a broad range of admissible initial states converge toward nearly identical response directions, implying that the resulting transport behavior is determined primarily by the operator rather than by the particular incoming state. Although the model is intended as a minimal transport construction rather than a realistic biochemical simulation, it illustrates how local coherence dynamics can generate observable geometric structure through recursive transport. In this framework, the helical twist appears as a derived consequence of the operator-supported transport dynamics rather than as an externally prescribed geometric parameter.<\/p>\n\n\n\n

Available Document<\/h3>\n\n\n\n

DOI:<\/strong> 10.5281\/zenodo.20607906<\/code><\/p>\n\n\n\n

Citation:<\/strong>
Petersen, B. L. (2026). Emergent Duplex Helicity from Coherence Alignment and Transport. Zenodo. https:\/\/doi.org\/10.5281\/zenodo.20607906<\/a><\/p>\n\n\n\n

Representative Figure<\/h3>\n\n\n\n
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